Search Results for "python data analysis"
Sort By:
Showing 31 open source projects for "python data analysis"
View related business solutions-
1
reticulate
R Interface to Python
reticulate is an R package from Posit that creates seamless interoperability between R and Python. It lets you call Python modules, classes, and functions from within R, automatically translating between R and Python data structures. Useful for combining Python tooling with R projects, data analysis, and RMarkdown reports. -
2
Airbyte
Data integration platform for ELT pipelines from APIs, databases
We believe that only an open-source solution to data movement can cover the long tail of data sources while empowering data engineers to customize existing connectors. Our ultimate vision is to help you move data from any source to any destination. Airbyte already provides the largest catalog of 300+ connectors for APIs, databases, data warehouses, and data lakes. Moving critical data with Airbyte is as easy and reliable as flipping on a switch. Our teams process more than 300 billion rows... -
3
Dagster
An orchestration platform for the development, production
Dagster is an orchestration platform for the development, production, and observation of data assets. Dagster as a productivity platform: With Dagster, you can focus on running tasks, or you can identify the key assets you need to create using a declarative approach. Embrace CI/CD best practices from the get-go: build reusable components, spot data quality issues, and flag bugs early. Dagster as a robust orchestration engine: Put your pipelines into production with a robust... -
4
Recap
Recap tracks and transform schemas across your whole application
Recap is a schema language and multi-language toolkit to track and transform schemas across your whole application. Your data passes through web services, databases, message brokers, and object stores. Recap describes these schemas in a single language, regardless of which system your data passes through. Recap schemas can be defined in YAML, TOML, JSON, XML, or any other compatible language. -
5
CellTypist
A tool for semi-automatic cell type classification, harmonization
CellTypist is an automated tool for cell type classification, harmonization, and integration. Classification, transfer cell type labels from the reference to query dataset. Harmonization, match and harmonize cell types defined by independent datasets. integration, integrate cell and cell types with supervision from harmonization. CellTypist recapitulates cell type structure and biology of independent datasets. Regularised linear models with Stochastic Gradient Descent provide a fast and... -
6
Apache DevLake
Apache DevLake is an open-source dev data platform
Apache DevLake is an open-source dev data platform that ingests, analyzes, and visualizes the fragmented data from DevOps tools to extract insights for engineering excellence, developer experience, and community growth. Apache DevLake is designed for developer teams looking to make better sense of their development process and to bring a more data-driven approach to their own practices. You can ask Apache DevLake many questions regarding your development process. Just connect and query. Your... -
7
harmonypy
Integrate multiple high-dimensional datasets with fuzzy k-means
Harmony is an algorithm for integrating multiple high-dimensional datasets. harmonypy is a port of the harmony R package by Ilya Korsunsky. Harmony is a general-purpose R package with an efficient algorithm for integrating multiple data sets. It is especially useful for large single-cell datasets such as single-cell RNA-seq. -
8
KubeRay
A toolkit to run Ray applications on Kubernetes
KubeRay is a powerful, open-source Kubernetes operator that simplifies the deployment and management of Ray applications on Kubernetes. It offers several key components. KubeRay core: This is the official, fully-maintained component of KubeRay that provides three custom resource definitions, RayCluster, RayJob, and RayService. These resources are designed to help you run a wide range of workloads with ease. -
9
Stanford Data Miner
Tools for integration and analysis of heterogeneous immunological data
An extensive description of this system is published in the Journal of Translational Medicine (http://www.translational-medicine.com/). In brief, the system consists of two main web applications, a data integration app and a data exploration app. The data integration app is a fully custom Java "Web 2.0" product called Sherpa. Sherpa uses Seam, a platform integrating Asynchronous JavaScript and XML (AJAX), JavaServer Faces (JSF), the Java Persistence API (JPA), and Enterprise Java Beans... -
10
Pytente
Uma Ferramenta Computacional para Análise e Recuperação de Patentes
O Pytente é uma solução avançada para automatizar o processo de coleta, armazenamento e tratamento de dados bibliográficos de patentes. A ferramenta foi projetada para simplificar a coleta de grandes volumes de dados em repositórios de acesso aberto. O Pytente garante o armazenamento estruturado das informações, além da validação e eliminação de registros duplicados. Dentre as diversas funcionalidades disponibilizadas pela ferramenta, destacam-se a extração personalizada de subconjuntos de... -
11
Mara Pipelines
A lightweight opinionated ETL framework, halfway between plain scripts
This package contains a lightweight data transformation framework with a focus on transparency and complexity reduction. Data integration pipelines as code: pipelines, tasks and commands are created using declarative Python code. PostgreSQL as a data processing engine. Extensive web ui. The web browser as the main tool for inspecting, running and debugging pipelines. GNU make semantics. -
12
PANDORA
Revolutionizing Biomedical Research with Advanced Machine Learning
...Join us and make SIMON even cooler! Exploratory analysis of machine learning results with the help of many different visualization techniques will give you instant insights into models and data. -
13
scArches
Reference mapping for single-cell genomics
Single-cell architecture surgery (scArches) is a package for reference-based analysis of single-cell data. scArches allows your single-cell query data to be analyzed by integrating it into a reference atlas. By mapping your data into an integrated reference you can transfer cell-type annotation from reference to query, identify disease states by mapping to healthy atlas, and advanced applications such as imputing missing data modalities or spatial locations. -
14
Open Source Data Quality and Profiling
World's first open source data quality & data preparation project
This project is dedicated to open source data quality and data preparation solutions. Data Quality includes profiling, filtering, governance, similarity check, data enrichment alteration, real time alerting, basket analysis, bubble chart Warehouse validation, single customer view etc. defined by Strategy. This tool is developing high performance integrated data management platform which will seamlessly do Data Integration, Data Profiling, Data Quality, Data Preparation, Dummy Data Creation, Meta Data Discovery, Anomaly Discovery, Data Cleansing, Reporting and Analytic. ... -
15
CloverDX
Design, automate, operate and publish data pipelines at scale
...Simple data manipulation jobs can be created visually. More complex business logic can be implemented using Clover's domain-specific-language CTL, in Java or languages like Python or JavaScript. Through its DataServices functionality, it allows to quickly turn data pipelines into REST API endpoints. The platform allows to easily scale your data job across multiple cores or nodes/machines. -
16
Grinn
graph database and R package for omic data integration
http://kwanjeeraw.github.io/grinn/ -
17
Hetionet
Hetionet: an integrative network of disease
Hetionet is a hetnet — network with multiple node and edge (relationship) types — which encodes biology. The hetnet was designed for Project Rephetio, which aims to systematically identify why drugs work and predict new therapies for drugs. The JSON and Neo4j formats contain node and edge properties, which are absent in the TSV and matrix formats, including licensing information. Therefore the recommended formats are JSON and Neo4j. Our hetio package in Python reads the JSON format, but it... -
18
optPBN
An optimization toolbox for probabilistic Boolean networks
We introduce optPBN, a Matlab-based toolbox for the optimization of probabilistic Boolean networks (PBN) which operates under the framework of the BN/PBN toolbox from Shmulevich et al. optPBN offers an easy generation of probabilistic Boolean networks from Boolean rule-based modeling and allows for flexible measurement data integration from multiple experiments and a subsequent integrated optimization problem generation which then can be solved with different optimizers. Thereby optPBN... -
19
Open Information Integration Tool Suite (Open II) is used by analysts and programmers to accelerate data integration and harmonization across organizations. OpenII has a neutral schema repository for browsing and comparing all sorts of data models. OpenII is built as a Rich Client Platform Application on top of Eclipse 3.x. Developers need to download Eclipse, install the RCP support, the Fatjar plugin and the Delta Pack in one of the 3.x flavors. Release Notes Release Date: Jan...
-
20
CMIS Input plugin for Pentaho
Allows querying Content Management Systems that use the CMIS.
...Imagine using the information extracted for statistical purposes, for creating reports and, more generally, to analyse your document archives in a way unthinkable until now with the current tools available. All this is possible within the Pentaho Suite, the Open Source Business Intelligence platform, which is useful to the extraction and analysis of structured and semi-structured data. With this goal (the extraction and analysis of data) has been designed and developed the CMIS Input plugin for Pentaho Data Integration (Kettle) that allows querying Content Management Systems that use the CMIS interoperability standard. The data, once extracted, can be stored and analyzed and perhaps presented in customized reports be published in various formats for the end user (PDF, Excel, etc..). -
21
RDF Content Provider for iQser GIN
Plugin to connect RDF sources with the GIN Server
GIN Server is a semantic middleware for easy data integration and automized analysis. The extendable architecture allows to plugin in data sources, analytics and event handling. This RDF Content Provider enables access to Semantic Web Content as an RDF file or SPAEQL endpoint. -
22
Framework for text mining, data integration and data analysis. Keywords: ontology and graph alignment, relation mining, warehouse, semantic database integration, bioinformatics, systems biology, microarray, Java.
-
23
-
24
This disease-centric project contributes data integration and analysis tools from the Institute for Systems Biology (ISB). We offer this project to the research community to further our efforts in disease prediction and prevention.
-
25
DataSync Suite is an open source platform for integrating tools like Zimbra, SugarCRM, and Drupal. The tool is focused on a single sign-on, application data integration, and fast, flexible deployment.
