Showing 988 open source projects for "python data analysis"

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    The Most Powerful Software Platform for EHSQ and ESG Management

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  • 1
    Olex2 is visualisation software for small-molecule crystallography developed at Durham University/EPSRC. It provides comprehensive tools for crystallographic model manipulation for the end user and an extensible development framework for programmers. The project has been supported by Olexsys Ltd since 2010.
    Downloads: 0 This Week
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  • 2
    Pydicom by examples

    Pydicom by examples

    Basic and intermediate examples of DICOM library with Jupyter

    Basic and intermediate examples to read, modify and write DICOM files with Python code using Jupyter - To install Jupyter - https://jupyter.org/install ====== All examples are based on Pydicom. An open source library - https://pydicom.github.io/
    Downloads: 0 This Week
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  • 3
    raxmlGUI
    RELEASE NOTE: Get raxmlGUI 2.0 at the NEW PROJECT LOCATION: https://antonellilab.github.io/raxmlGUI/ raxmlGUI is a graphical user interface to RAxML, one of the most popular and widely used software for phylogenetic inference using maximum likelihood. A userfriendly graphical front-end for phylogenetic analyses using RAxML (Stamatakis, 2006). Please cite: Silvestro, Michalak (2012) - raxmlGUI: a graphical front-end for RAxML. Organisms Diversity and Evolution 12, 335-337. DOI:...
    Downloads: 14 This Week
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  • 4

    Molecular Dynamics Studio

    Molecular Dynamics Cell Construction

    This is a collection of software modifications created to integrate NanoEngineer-1, PACKMOL and MSI2LMP for the purpose of easily creating molecular dynamics cells. NanoEngineer-1 is a molecular CAD software written by Nanorex and provides the user an easy way to create molecules, while the software modifications allow the user to type atoms using multiple force fields. PACKMOL can generate a random collection of molecules using the molecule templates from NanoEngineer-1 thus providing the...
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    Downloads: 38 This Week
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  • Award-Winning Medical Office Software Designed for Your Specialty Icon
    Award-Winning Medical Office Software Designed for Your Specialty

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  • 5
    CSV-Sanitizer

    CSV-Sanitizer

    Allows the user to automatically create non-sensitive, sanitized CSVs

    This project will allow the user to create non-sensitive, sanitized CSVs automatically, given any CSVs present. Its purpose? Create an easy way for people to share tasks or code that rely on sensitive CSVs, without exposing sensitive data. This project is conducted in Python3. Please see the Readme for more information :)
    Downloads: 0 This Week
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  • 6
    GEOMS2

    GEOMS2

    Geostatistics and geosciences modeling software

    GEOMS2 is a geostatistics and geosciences modeling software. Provides interface for grid (mesh), point, surface and data (non-spatial) objects. It has a 3D viewer and 2D plots using the well known Python engines Mayavi and Matplotlib. It has several functions to manipulate your data as well as provide univariate and multivariate analysis. NOTE: The software is still an early beta. Please tell us if you found a bug. Download datasets for students of Geostatistics 2017 (Petroleum Engineering): https://sourceforge.net/projects/geoms2/files/Geostatistics_Petroleum.zip/download Download datasets for students of Geostatistics 2017 (Geology and Mining Engineering): https://sourceforge.net/projects/geoms2/files/Geostatistics_Mining.zip/download Old: http://sourceforge.net/projects/geoms2/files/SETS_geoestatistica2_2015.7z/download https://sites.google.com/site/cmrpsoftware/downloads/Quarry_sets.7z?...
    Downloads: 6 This Week
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  • 7
    Meteorological Product Exchanger

    Meteorological Product Exchanger

    Sundew:a tcp/ip WMO switch, Sarracenia: next gen transfer engine.

    We have moved to https://github.com/MetPX everything on sourceforge is obsolete. metpx is the Meteorological Product Exchanger. Intended for use in industrial/government weather forecast operations, for exchange of meteorological bulletins over TCP/IP.
    Downloads: 0 This Week
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  • 8
    PyRobot

    PyRobot

    An Open Source Robotics Research Platform

    ...It also plugs into simulation backends, letting you prototype perception and control algorithms before deploying on physical robots. By standardizing common operations and providing examples, PyRobot reduces boilerplate and encourages best practices in perception-control loops, data collection, and benchmarking.
    Downloads: 0 This Week
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  • 9
    UnsupervisedMT

    UnsupervisedMT

    Phrase-Based & Neural Unsupervised Machine Translation

    Unsupervised Machine Translation is a research repository that implements both phrase-based SMT and neural MT approaches for translation without parallel corpora. The neural component supports multiple architectures—seq2seq, biLSTM with attention, and Transformer—and allows extensive parameter sharing across languages to improve data efficiency. Training relies on denoising auto-encoding and back-translation, with on-the-fly, multithreaded generation of synthetic parallel data to continually...
    Downloads: 1 This Week
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  • 10
    pyfolio

    pyfolio

    Portfolio and risk analytics in Python

    pyfolio is a Python library for performance and risk analysis of financial portfolios developed by Quantopian Inc. It works well with the Zipline open source backtesting library. At the core of pyfolio is a so-called tear sheet that consists of various individual plots that provide a comprehensive image of the performance of a trading algorithm. Here's an example of a simple tear sheet analyzing a strategy.
    Downloads: 0 This Week
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  • 11

    ParamIT

    a Toolset for Molecular Mechanical Force Field Parameterization

    ParamIT is a toolkit aiding the development of molecular mechanical force field parameterization of small, drag like, molecules within CHARMM general force field (CGenFF) protocol. The developed toolkit helps the researchers in following ways: 1) automating the creation of multiple input files for quantum and molecular mechanics programs, 2) automating the output analysis and 3) substitute the use of full MM programs with a faster specialized one. The developed tools include: 1) generator of...
    Downloads: 0 This Week
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  • 12
    LaueTools

    LaueTools

    open source python packages for X-ray MicroLaue Diffraction analysis

    LaueTools is an open-source project for white beam Laue x-ray microdiffraction data analysis including tools in image processing, peaks searching & indexing, crystal structure solving (orientation & strain) and data & grain mapping visualisation. Python 3 Code and new features are now at: https://gitlab.esrf.fr/micha/lauetools
    Downloads: 1 This Week
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  • 13
    Xplico

    Xplico

    Xplico is a Network Forensic Analysis Tool (NFAT)

    Xplico is a Network Forensic Analysis Tool (NFAT). The goal of Xplico is extract from an internet traffic capture the applications data contained. For example, from a pcap file Xplico extracts each email (POP, IMAP, and SMTP protocols), all HTTP contents, each VoIP call (SIP, MGCP, MEGACO, RTP), IRC, WhatsApp... Xplico is able to classify more than 140 (application) protocols.
    Downloads: 20 This Week
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  • 14
    CMD Plot Tool

    CMD Plot Tool

    Calculates and plots Colour Magnitude Diagrams from Astronomical data

    CMD Plot Tool calculates and plots Colour Magnitude Diagrams (CMDs) from astronomical photometric data, e.g. of a star cluster observed in two filter bandpasses. It can handle multiple file formats (plain text, DAOPHOT .mag files, ACS Survey of Galactic Globular Clusters .zpt files) to generate professional and customised plots, without the usual steep learning curve. Development using Python, OOP and a formal software development lifecycle model (Agile) allowed for the creation of an application that can be deployed on multiple systems. ...
    Downloads: 0 This Week
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  • 15

    reditools

    RNA editing detection by NGS data

    REDItools are python scripts developed with the aim to study RNA editing at genomic scale by next generation sequencing data. RNA editing is a post-transcriptional phenomenon involving the insertion/deletion or substitution of specific bases in precise RNA localizations. In human, RNA editing occurs by deamination of cytosine to uridine (C-to-U) or mostly by the adenosine to inosine (A-to-I) conversion through ADAR enzymes.
    Downloads: 2 This Week
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  • 16
    plot.py

    plot.py

    direct data plotting and evaluation

    The data treatment includes non-linear fitting, integration and differentiation, peak-finder and more. User python code can be executed in the integrated IPython console.
    Downloads: 0 This Week
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  • 17
    This is a Python-based efficient implementation of several semantic similarity measures. The target is to enable fast and easy calculation of similarity between proteins and genes using the Gene Ontology (GO).
    Downloads: 0 This Week
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  • 18

    TimingDrawer

    Text based timing diagram generator

    This tool generates timing diagrams for documenting hardware design. It reads the description from a text file with a simple syntax. It generates vector graphic (EPS, SVG or EMF format). It can be used in command line mode or with a GUI. It is written in Python and works on any platform.
    Downloads: 0 This Week
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  • 19

    dadosSemiotica

    Collecter and manager of semiotica annalisis data

    This program is a web application to collect and organize data of text analysis. It works with sets of texts and the analysis are done on portions of the length of a sentence. One of the preprocessing modules is based on CoGroo (A LibreOffice & OpenOffice.org Portuguese Grammar Checker).
    Downloads: 0 This Week
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  • 20
    PyTom

    PyTom

    http://www.sciencedirect.com/science/article/pii/S1047847711003492

    PyTom is a toolbox developed for interpreting cryo electron tomography data. All steps from reconstruction, localization, alignment and classification are covered with standard and improved methods. Please sign up to our mailing list to keep up with the most recent updates and versions.
    Downloads: 0 This Week
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  • 21

    YFitter

    Fitting Y chromosome haplogroups by maximum likelihood

    Yfitter is a program for assigning Y chromosome haplogroups to individuals sequenced at low coverage. It is designed to be used in a samtools/bcftools pipeline. Yfitter also supports haplogrouping using chip genotype data.
    Downloads: 0 This Week
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  • 22

    CIF2Cell

    Generating cells for electronic structure calculations from CIF files

    CIF2Cell is a tool to generate the geometrical setup for various electronic structure codes from a CIF (Crystallographic Information Framework) file. The program currently supports output for a number of popular electronic structure programs, including ABINIT, ASE, CASTEP, CP2K, CPMD, CRYSTAL09, Elk, EMTO, Exciting, Fleur, FHI-aims, Hutsepot, MOPAC, Quantum Espresso, RSPt, Siesta, SPR-KKR, VASP. Also exports some related formats like .coo, .cfg and .xyz-files. The program has been published...
    Downloads: 9 This Week
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  • 23
    GDL - GNU Data Language, a free IDL (Interactive Data Language, see http://ittvis.com/idl/) compatible incremental compiler.
    Downloads: 0 This Week
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  • 24
    Awesome Math

    Awesome Math

    This is the Curriculum for "How to Learn Mathematics Fast"

    This repository is a curated roadmap for learning the core mathematics used in computer science, machine learning, and data science without getting lost in unnecessary detours. It organizes topics like algebra, calculus, linear algebra, probability, and statistics into a pragmatic sequence that favors intuition and problem-solving over purely formal proofs. The materials emphasize short, high-leverage resources—video lectures, concise notes, and hands-on exercises—that help you build...
    Downloads: 0 This Week
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  • 25

    MIPPY

    Modular Image Processing in Python

    MIPPY is a minimalistic DICOM image browser with built-in image processing modules. Its modular design means it can be extended with any number of user-created modules for image processing and analysis.
    Downloads: 0 This Week
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