https://sourceforge.net/p/codonphyml/activity/Recent activity for codonPhyMLenThu, 13 Feb 2025 11:23:38 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/9bd19f7993/?limit=25#3d9fsorry, I mixed up the options from phyml with codonphyml and cant delete the topic.Fernanda GiersdorfThu, 13 Feb 2025 11:23:38 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/9bd19f7993/?limit=25#3d9fhttps://sourceforge.net/p/codonphyml/discussion/users/thread/9bd19f7993/?limit=25#eca9Dear developers, when running codonphyml -i alignment_noStop.phy -d codon -b 100 -w --fmodel F3X4 i get an error . Launch bootstrap analysis on the most likely tree... Segmentation fault (core dumped) this only happens when using the bootstrap option, regardless of the number of bootstraps. without the bootstrap option, the program runs without any issues. Attached is the alignment file used. Do you have suggestions on how to fix this? Thank you! FernandaFernanda GiersdorfThu, 13 Feb 2025 11:07:19 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/9bd19f7993/?limit=25#eca9https://sourceforge.net/p/codonphyml/discussion/users/thread/d31ba78e/?limit=25#066b/4b2cHello Minh, Thank you for your message and sorry for the late reply. You have to set an environment variable. Check this link: http://software.intel.com/en-us/mkl-windows-developer-guide-setting-the-number-of-threads-using-an-openmp-environment-variable I am planning to be more active this year. Should you require further assistance, let me know! BestMarcelo S ZanettiFri, 13 Apr 2018 20:38:33 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/d31ba78e/?limit=25#066b/4b2chttps://sourceforge.net/p/codonphyml/discussion/users/thread/d31ba78e/?limit=25#066bDear developers, I saw that codonPhyML has a omp version to utilize multicore, which is very nice compared with PhyML to reduce waiting time. I could compile the program already. However, I could not find anywhere how to specify the number of cores/threads to use. Can you please help? Thanks, MinhAnonymousFri, 13 Apr 2018 20:38:18 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/d31ba78e/?limit=25#066bhttps://sourceforge.net/p/codonphyml/discussion/users/thread/660bef9c/?limit=25#df03Hi Andrey. Thank you for your feedback. I will redirect the error messages to a log...Marcelo S ZanettiFri, 15 Jul 2016 12:58:44 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/660bef9c/?limit=25#df03https://sourceforge.net/p/codonphyml/discussion/users/thread/660bef9c/?limit=25#5d5bThe --quiet option doesn't prevent the program from prompting for user input in case...Andrey RozenbergFri, 15 Jul 2016 10:08:36 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/660bef9c/?limit=25#5d5bhttps://sourceforge.net/p/codonphyml/discussion/users/thread/660bef9c/?limit=25#5d5bThe --quiet option doesn't prevent the script from prompting for user input in case...Andrey RozenbergFri, 15 Jul 2016 09:59:26 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/660bef9c/?limit=25#5d5bhttps://sourceforge.net/p/codonphyml/discussion/users/thread/660bef9c/?limit=25#5d5bThe --quiet option doesn't prevent the script from prompting for user input in case...Andrey RozenbergFri, 15 Jul 2016 09:57:24 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/660bef9c/?limit=25#5d5bhttps://sourceforge.net/p/codonphyml/discussion/users/thread/cf17f6c7/?limit=25#e512/83e8Hi Sorry for the late reply again! So you try to run the exact command line above...Marcelo S ZanettiMon, 02 May 2016 23:02:03 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/cf17f6c7/?limit=25#e512/83e8https://sourceforge.net/p/codonphyml/discussion/users/thread/cf17f6c7/?limit=25#ffb1/a07bHi Sorry for the late reply again! So you try to run the exact command line above...Marcelo S ZanettiMon, 02 May 2016 23:01:38 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/cf17f6c7/?limit=25#ffb1/a07bhttps://sourceforge.net/p/codonphyml/discussion/users/thread/cf17f6c7/?limit=25#ffb1Hi, I'm getting the same error. Was there a solution? CheersAnonymousMon, 02 May 2016 22:53:14 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/cf17f6c7/?limit=25#ffb1https://sourceforge.net/p/codonphyml/discussion/users/thread/cf17f6c7/?limit=25#8fa6Hi sorry for the late reply. Last semester was a busy one. Can you please attach...Marcelo S ZanettiThu, 07 Jan 2016 21:09:53 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/cf17f6c7/?limit=25#8fa6https://sourceforge.net/p/codonphyml/discussion/users/thread/cf17f6c7/?limit=25#e512Hi, when I try to run codonphyml with the following command line (the input file...AnonymousThu, 07 Jan 2016 21:07:59 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/cf17f6c7/?limit=25#e512https://sourceforge.net/p/codonphyml/discussion/users/thread/ca6e0f33/?limit=25#6edfHi, I have alignment in which some sequences are complete and start from first nucletide...AnonymousThu, 07 Jan 2016 21:03:45 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/ca6e0f33/?limit=25#6edfhttps://sourceforge.net/p/codonphyml/discussion/users/thread/ca6e0f33/?limit=25#c49dHi Marcin, sorry for the late reply. Moved to another place last semester, and did...Marcelo S ZanettiThu, 07 Jan 2016 21:03:37 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/ca6e0f33/?limit=25#c49dhttps://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#4a54Great!Marcelo S ZanettiThu, 07 Jan 2016 20:53:47 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#4a54https://sourceforge.nethttp%3A//sourceforge.net/projects/codonphyml/files/codonphyml_multi.tgz/downloadcodonPhyMLTue, 03 Mar 2015 19:31:04 -0000http://sourceforge.net/projects/codonphyml/files/codonphyml_multi.tgz/downloadhttps://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#2bb7Great, thanks! I will use the trees generated. Thanks, PetePeter ThorpeFri, 13 Feb 2015 16:48:43 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#2bb7https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#2d02/a8b2Hi Peter, cool. I deleted some messages so it reads better now. While I am not read...Marcelo S ZanettiFri, 13 Feb 2015 16:15:52 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#2d02/a8b2https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#2d02Hi Marcelo, Sorry your reply get nested in the conversation above (i didnt see it)...Peter ThorpeFri, 13 Feb 2015 16:07:43 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#2d02https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#dc84/09b4Hi Peter, are you satisfied with my answer? Please let me know. Thx.Marcelo S ZanettiFri, 13 Feb 2015 13:33:25 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#dc84/09b4https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#dc84/deedsorry for the late reply, wrote above.Marcelo S ZanettiWed, 11 Feb 2015 17:08:08 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#dc84/deedhttps://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#477b/eb1fHi Peter, sourceforge was offline so I could not reply before. So you are using the...Marcelo S ZanettiWed, 11 Feb 2015 17:07:16 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#477b/eb1fhttps://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#477b/eb1fHi Peter, sourceforge was offline so I could not reply before. So you are using the...Marcelo S ZanettiWed, 11 Feb 2015 17:06:44 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#477b/eb1fhttps://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#477b/eb1fHi Peter, sourceforge was offline so I could not reply before. So you are using the...Marcelo S ZanettiWed, 11 Feb 2015 17:05:21 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#477b/eb1fhttps://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#d346/3bc5Hi Peter, I am sorry, too many things to do, ended up forgeting your question. Will...Marcelo S ZanettiMon, 09 Feb 2015 11:55:13 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#d346/3bc5https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#9f99Thank you for the explanations above. Can I ask you about the 4 DN/DS values again?...Peter ThorpeWed, 28 Jan 2015 15:03:05 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#9f99https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#9f99Thank you for the explanations above. Can I ask you about the 4 DN/DS values again?...Peter ThorpeWed, 28 Jan 2015 15:02:29 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#9f99https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#feb5Cool, thank you for the explanation. Sounds very interesting. I will take a look...Marcelo S ZanettiWed, 28 Jan 2015 13:54:07 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#feb5https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#477bHI Marcelo, Thank you very much for taking the time to discuss this will me!!!! Much...Peter ThorpeWed, 28 Jan 2015 13:43:31 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#477bhttps://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#f3b3Hi Peter, Thank you for using Codonphyml. I see you are confused with some concepts....Marcelo S ZanettiWed, 28 Jan 2015 13:12:59 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#f3b3https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#f3b3Hi Peter, Thank you for using Codonphyml. I see you are confused with some concepts....Marcelo S ZanettiWed, 28 Jan 2015 13:10:01 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#f3b3https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#f3b3Hi Peter, Thank you for using Codonphyml. I see you are confused with some concepts....Marcelo S ZanettiWed, 28 Jan 2015 13:07:29 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#f3b3https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#f3b3Hi Peter, Thank you for using Codonphyml. I see you are confused with some concepts....Marcelo S ZanettiWed, 28 Jan 2015 13:00:29 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#f3b3https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#f3b3Hi Peter, Thank you for using Codonphyml. I see you are confused with some concepts....Marcelo S ZanettiWed, 28 Jan 2015 12:58:09 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#f3b3https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#f3b3Hi Peter, Thank you for using Codonphyml. I see you are confused with some concepts....Marcelo S ZanettiWed, 28 Jan 2015 12:57:32 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#f3b3https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#ef4eDear Users - please help!!, I have run CodonPhyml on my DNA/aligned orthologous clusters...Peter ThorpeWed, 28 Jan 2015 12:16:07 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/bdea7c84/?limit=25#ef4ehttps://sourceforge.net/p/codonphyml/discussion/users/thread/e9ffefdf/?limit=25#74ae/0985Ok, don't hesitate to write if you have any further problems. Best!Marcelo S ZanettiSun, 18 Jan 2015 12:21:58 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/e9ffefdf/?limit=25#74ae/0985https://sourceforge.net/p/codonphyml/code/309/added changelog and version numberStefanTue, 11 Nov 2014 13:07:50 -0000https://sourceforge.net/p/codonphyml/code/309/https://sourceforge.net/p/codonphyml/code/308/Added AB aa model by Alexander MirskyStefanTue, 11 Nov 2014 13:04:36 -0000https://sourceforge.net/p/codonphyml/code/308/https://sourceforge.net/p/codonphyml/discussion/users/thread/e9ffefdf/?limit=25#2483/9b33Hi Ramiro, this is the answer I got from Dr. Anisimova, she developed the aLRT method....Marcelo S ZanettiThu, 30 Oct 2014 15:37:19 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/e9ffefdf/?limit=25#2483/9b33https://sourceforge.net/p/codonphyml/discussion/users/thread/e9ffefdf/?limit=25#2483/9b33Hi Ramiro, this is the answer I got from Dr. Anisimova, she developed the aLRT method....Marcelo S ZanettiThu, 30 Oct 2014 15:36:44 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/e9ffefdf/?limit=25#2483/9b33https://sourceforge.net/p/codonphyml/discussion/users/thread/e9ffefdf/?limit=25#2483/41a9Hi Ramiro, sorry for the late reply. Sourceforge is not notifying me correctly on...Marcelo S ZanettiThu, 30 Oct 2014 15:02:42 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/e9ffefdf/?limit=25#2483/41a9https://sourceforge.net/p/codonphyml/discussion/users/thread/e9ffefdf/?limit=25#2483/41a9Hi Ramiro, sorry for the late reply. Sourceforge is not notifying me correctly on...Marcelo S ZanettiThu, 30 Oct 2014 14:58:36 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/e9ffefdf/?limit=25#2483/41a9https://sourceforge.net/p/codonphyml/discussion/users/thread/4c1d5cbb/?limit=25#40d1/e198Hi Greta, Thank you again! The model selection is still in the TODO list :-), sorry...Marcelo S ZanettiMon, 25 Aug 2014 13:56:53 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/4c1d5cbb/?limit=25#40d1/e198https://sourceforge.net/p/codonphyml/discussion/users/thread/e9ffefdf/?limit=25#7bf7/5136Hi Greta, Thank you for your interest. The MAC binary does not support OpenMp neither...Marcelo S ZanettiMon, 25 Aug 2014 13:51:12 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/e9ffefdf/?limit=25#7bf7/5136https://sourceforge.nethttp%3A//sourceforge.net/projects/codonphyml/files/codonPhyML_macosx_binary_1.00_201407.24/downloadcodonPhyMLFri, 25 Jul 2014 11:28:04 -0000http://sourceforge.net/projects/codonphyml/files/codonPhyML_macosx_binary_1.00_201407.24/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/codonphyml/files/codonphyml_osx_201407.24/downloadcodonPhyMLFri, 25 Jul 2014 10:01:03 -0000http://sourceforge.net/projects/codonphyml/files/codonphyml_osx_201407.24/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/codonphyml/files/codonPhyML_dev_1.00_201407.24.zip/downloadcodonPhyMLThu, 24 Jul 2014 19:49:05 -0000http://sourceforge.net/projects/codonphyml/files/codonPhyML_dev_1.00_201407.24.zip/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/codonphyml/files/codonPhyML_Manual.pdf/downloadcodonPhyMLThu, 24 Jul 2014 19:49:05 -0000http://sourceforge.net/projects/codonphyml/files/codonPhyML_Manual.pdf/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/codonphyml/files/codonPhyML_windows_binary_1.00_201407.24.exe/downloadcodonPhyMLThu, 24 Jul 2014 19:49:05 -0000http://sourceforge.net/projects/codonphyml/files/codonPhyML_windows_binary_1.00_201407.24.exe/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/codonphyml/files/codonPhyML_Manual.pdf.zip/downloadcodonPhyMLThu, 24 Jul 2014 19:48:04 -0000http://sourceforge.net/projects/codonphyml/files/codonPhyML_Manual.pdf.zip/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/codonphyml/files/codonPhyML_windows_binary_1.00_201306.18.exe/downloadcodonPhyMLThu, 24 Jul 2014 19:48:04 -0000http://sourceforge.net/projects/codonphyml/files/codonPhyML_windows_binary_1.00_201306.18.exe/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/codonphyml/files/codonPhyML_dev_1.00_201306.18.zip/downloadcodonPhyMLThu, 24 Jul 2014 19:48:04 -0000http://sourceforge.net/projects/codonphyml/files/codonPhyML_dev_1.00_201306.18.zip/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/codonphyml/files/codonPhyML_windows_binary_1.00_201407.24.exe/downloadcodonPhyMLThu, 24 Jul 2014 19:43:03 -0000http://sourceforge.net/projects/codonphyml/files/codonPhyML_windows_binary_1.00_201407.24.exe/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/codonphyml/files/codonPhyML_windows_binary_1.00_201307.24.exe/downloadcodonPhyMLThu, 24 Jul 2014 19:43:03 -0000http://sourceforge.net/projects/codonphyml/files/codonPhyML_windows_binary_1.00_201307.24.exe/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/codonphyml/files/codonPhyML_Manual.pdf/downloadcodonPhyMLThu, 24 Jul 2014 19:43:03 -0000http://sourceforge.net/projects/codonphyml/files/codonPhyML_Manual.pdf/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/codonphyml/files/codonPhyML_dev_1.00_201407.24.zip/downloadcodonPhyMLThu, 24 Jul 2014 19:43:03 -0000http://sourceforge.net/projects/codonphyml/files/codonPhyML_dev_1.00_201407.24.zip/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/codonphyml/files/codonPhyML_windows_binary_1.00_201407.24.exe/downloadcodonPhyMLThu, 24 Jul 2014 19:29:04 -0000http://sourceforge.net/projects/codonphyml/files/codonPhyML_windows_binary_1.00_201407.24.exe/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/codonphyml/files/codonPhyML_dev_1.00_201407.24.zip/downloadcodonPhyMLThu, 24 Jul 2014 19:28:03 -0000http://sourceforge.net/projects/codonphyml/files/codonPhyML_dev_1.00_201407.24.zip/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/codonphyml/files/codonPhyML_windows_binary_1.00_201307.24.exe/downloadcodonPhyMLThu, 24 Jul 2014 19:28:03 -0000http://sourceforge.net/projects/codonphyml/files/codonPhyML_windows_binary_1.00_201307.24.exe/downloadhttps://sourceforge.nethttp%3A//sourceforge.net/projects/codonphyml/files/codonPhyML_Manual.pdf/downloadcodonPhyMLThu, 24 Jul 2014 19:28:03 -0000http://sourceforge.net/projects/codonphyml/files/codonPhyML_Manual.pdf/downloadhttps://sourceforge.net/p/codonphyml/bugs/7/inconsistency in parameter and manual description Marcelo S ZanettiThu, 24 Jul 2014 19:09:03 -0000https://sourceforge.net/p/codonphyml/bugs/7/https://sourceforge.net/p/codonphyml/code/307/Fixed bugs number 4 and numer 6 (sourceforge re...Marcelo S ZanettiThu, 24 Jul 2014 18:59:21 -0000https://sourceforge.net/p/codonphyml/code/307/https://sourceforge.net/p/codonphyml/bugs/5/?limit=25#d422John Denton also wrote this: "Would it be possible to get a version of the Windows...Marcelo S ZanettiThu, 24 Jul 2014 18:05:33 -0000https://sourceforge.net/p/codonphyml/bugs/5/?limit=25#d422https://sourceforge.net/p/codonphyml/bugs/4/Best between NNI and SPR is still brokenMarcelo S ZanettiThu, 24 Jul 2014 18:03:57 -0000https://sourceforge.net/p/codonphyml/bugs/4/https://sourceforge.net/p/codonphyml/bugs/4/?limit=25#73e0Commented out two sanity checks in file utilities.c, within function "Best_Of_NNI_And_SPR"....Marcelo S ZanettiThu, 24 Jul 2014 18:03:45 -0000https://sourceforge.net/p/codonphyml/bugs/4/?limit=25#73e0https://sourceforge.net/p/codonphyml/bugs/6/?limit=25#15a4Changed "int info;" to "int info=0;" in file models.c, function "PadeApprox". Must...Marcelo S ZanettiThu, 24 Jul 2014 17:59:22 -0000https://sourceforge.net/p/codonphyml/bugs/6/?limit=25#15a4https://sourceforge.net/p/codonphyml/bugs/6/Compiling error in models.c PADEAPPROXMarcelo S ZanettiThu, 24 Jul 2014 17:58:29 -0000https://sourceforge.net/p/codonphyml/bugs/6/https://sourceforge.net/p/codonphyml/bugs/6/?limit=25#15a4Changed "int info;" to "int info=0;" Must be caused by an extremely strict compiler...Marcelo S ZanettiThu, 24 Jul 2014 17:58:16 -0000https://sourceforge.net/p/codonphyml/bugs/6/?limit=25#15a4https://sourceforge.net/p/codonphyml/discussion/users/thread/e9ffefdf/?limit=25#7eba/da7fHi Cymon, sorry for the delay. I will look into it and will let you know asap. Thank...Marcelo S ZanettiMon, 28 Apr 2014 11:05:56 -0000https://sourceforge.net/p/codonphyml/discussion/users/thread/e9ffefdf/?limit=25#7eba/da7f